BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030G05LP1|AL429274
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1146 1182 0.0
3x_Contig1058 454 e-127
>3x_Contig1146
Length = 4612
Score = 1182 bits (596), Expect = 0.0
Identities = 604/606 (99%), Gaps = 1/606 (0%)
Strand = Plus / Minus
Query: 372 ccgtaaggtggagatccgaatcgattctctactgaagaatagtactgtagaaagtaaaaa 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4612 ccgtaaggtggagatccgaatcgattctctactgaagaatagtactgtagaaagtaaaaa 4553
Query: 432 ctctaggaaagaggtaataccaaaaattcggggggataaataacgcactagcaaagtgtt 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4552 ctctaggaaagaggtaataccaaaaattcggggggataaataacgcactagcaaagtgtt 4493
Query: 492 caacaagaaattaacccctttactcaacgtttgtcccaacattagaaataagactccatt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4492 caacaagaaattaacccctttactcaacgtttgtcccaacattagaaataagactccatt 4433
Query: 552 ggcgaatttgttcatatgctcattcttgacattcattcttaccaaatgatatgaagtaac 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4432 ggcgaatttgttcatatgctcattcttgacattcattcttaccaaatgatatgaagtaac 4373
Query: 612 tttgcacccttcttaaagaacaatgctgagcactagcacctacagcagtataaaccaatc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4372 tttgcacccttcttaaagaacaatgctgagcactagcacctacagcagtataaaccaatc 4313
Query: 672 ctatcgatgagcactggccgtttattggatcttattagtgtctttctttgccaatgtata 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4312 ctatcgatgagcactggccgtttattggatcttattagtgtctttctttgccaatgtata 4253
Query: 732 cattgaaaaatctcgatctttgacgttcagcaaattcaaaatcatcaacaaaccttaaaa 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4252 cattgaaaaatctcgatctttgacgttcagcaaattcaaaatcatcaacaaaccttaaaa 4193
Query: 792 tacccattcatgactattaactacataataaaaatactaagtgtttaaggtctttcactg 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4192 tacccattcatgactattaactacataataaaaatactaagtgtttaaggtctttcactg 4133
Query: 852 atttggtctgttatgaagatcagagctagcgacacctactaaatatggatacagagacag 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4132 atttggtctgttatgaagatcagagctagcgacacctactaaatatggatacagagacag 4073
Query: 912 aagctgagaagcaagagaggcataataactatcttaacgaactagcgga-saagatcgat 970
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4072 aagctgagaagcaagagaggcataataactatcttaacgaactagcggagcaagatcgat 4013
Query: 971 ggcttc 976
||||||
Sbjct: 4012 ggcttc 4007
>3x_Contig1058
Length = 3592
Score = 454 bits (229), Expect = e-127
Identities = 246/249 (98%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 1 ccaactccgttcaccattttctcaaaccagacaactataataaagttcgcaacacatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3343 ccaactccgttcaccattttctcaaaccagacaactataataaagttcgcaacacatgca 3402
Query: 61 aaggtgacacctaaactctcatatttggatctgataaagtgattgagttaatattgatgt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3403 aaggtgacacctaaactctcatatttggatctgataaagtgattgagtaaatattgatgt 3462
Query: 121 accaagtagaacggttcactgaccaactcaatcaatatactaagccatataaggaatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3463 accaagtagaacggttcactgaccaactcaatcaatatactaagccatataaggaatatg 3522
Query: 181 gaggctttgaagtatggaaggtcaatgaagtacgaatttagattagagtattgccatgaa 240
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 3523 gaggctttgaagtatggaaggtcaatgaagtacgaattt-gattagagta-tgccatgaa 3580
Query: 241 attaggata 249
|||||||||
Sbjct: 3581 attaggata 3589
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7283
Number of Sequences: 1807
Number of extensions: 7283
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 2
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)